Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDINMFILYFFIYSVLGWAWEEVFCSISEKKLVYRGFLYGPYCPIYGFGVTAVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPLNVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIKSVTSMLSFQKALAEFNEKLNAQANELKA---SVKERAKEFEEGLLKKQENVDMKIAEIEAKRKQDKELAASMRKLKFNERRMLKSFPKMKVKRAAPFKNLNKSLLRVDKLKRK-- |
1YKH Chain:B ((2-130)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------TDRMTQLQICLDQMTEQFCATLNYIDKNHGFEVVPPEEFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDFV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 36681 for 511 contacts (71.8/contact) +
2D Compatibility (PS) -12310 + (NN) -12037 + (LL) 15396
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 24130.0 ( 47.22 by residue)
QMean score : 0.458
|
|
|