Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNENGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS
3QAO Chain:A ((2-109))
----------------NAMQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDDPLF------DKNVALDMQRHLLIEKKQRIETMLATLDLTIKNE---------------------
General information:
TITO was launched using:
RESULT:
Template:
3QAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32544 for 647 contacts (-50.3/contact) +
2D Compatibility (PS) -12321 + (NN) -7585 + (LL) 2712
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -55538.0 ( -85.84 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_3QAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QAO-query.scw
PDB file :
Tito_Scwrl_3QAO.pdb
: