Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKILLVCAAGMSTS-LLVTKMKAHATSIGEEIEIEALPVSEAS--NVVDKMDIVMLGPQVRYQKPQVDELVQGRIPVIVIDMKDYGMLNGKAVLEKAFAEIG
3F6R Chain:A ((2-59))
-SKVLIVFGSSTGNTESIAQKLEELIAAGGHE--VTLLNAADASAENLADGYDAVLFGCSA------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34927 for 338 contacts (-103.3/contact) +
2D Compatibility (PS) -5806 + (NN) -1424 + (LL) 3836
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -41421.0 ( -122.55 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_3F6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6R-query.scw
PDB file :
Tito_Scwrl_3F6R.pdb
: