Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VIHSTLGGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMATLVFQGLLQIETAETRKLSTGKQILPDVHLIIGKSQAYSLQTTRVETTVDQPIQEMKAHFKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSSYREEVKRVFLRRIEAETSIGNADYQFETLKNKALENEGIAHYLESFSASLGKYIFSK-RMEKKWSQLDLALKSDLSPVIIGRLEAGDPDLTLRMYQKVCTVLGVKATFSVD |
4IA8 Chain:B ((6-65)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTAISGIERNSRNLTIKSLELIMKGLEV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23923 for 383 contacts (-62.5/contact) +
2D Compatibility (PS) -6305 + (NN) -2454 + (LL) 15360
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -23122.0 ( -60.37 by residue)
QMean score : 0.426
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