Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEMDPNTDLSSVTRPRATPVLTTFQFDSGKVGHIWTTFSEDQIDLNFACPEVLYKMIDVLMFYLEEGAEYVRLDAVGFMWKVPGTS----------------S------------IHLEETHEIVKLFRDLVDIAAPGTIIITETNVPHV-DNISYFGNGEKEAHMVYQFPLPPLVLHAIHHGNAKFLRNWAKNLELPEGKRTFFNFLASHDGIGLNPVRGIIPEAEILALVNDLEEEGALVSYKQNPDGSKSPYEINVTYMDALSKQADTDDLRLARFLVAHAVLMSIPGVPAVYVQSILGSRNDYLGVE-A-T---------SHNRSINRKKYDLAEITAE-------------------LEQRGSLRKATYDALTKLISTRKAESLFHPEIPMEVLESTAELFVVKRSSDAESIILIHNLSEKEVSYSLDSGVYTNLYKGS-TV-TGSDSIKLSGYEFCWLKTKNYREEQK |
| 3WY2 Chain:A ((151-538)) | ----------------------AWTFDSRRQQYYLHNFLTSQPDVNFHHPEARQAQLDNMRFWLDLGVDGFRLDTVNFYFHDAELRDNPPVPKGEAKTLGAPEANPYTWQRHVYDLSRPENLDFLKDLRALMD-EYPGTTTVGEIGDDNPLERMAEYTAGGDKLHMAYTFDLLNMP------HSASYLREVIERFQRLAGDAWPCWATSNHDVV---------------RSATRWGAD----------------------------------EDPHAYPKVMLAVLFSLRGSVCLYQGEELGLPEADVPFERIQDPYGKVLWPEFKGRDGCRTPMPWTDGEQGGFSPVEPWLPMEARHLELAVSRQQDDPNATLNTVRALLAFRRSHPALFDG-DLSLVDVGDDLLGFTRQKGDETLLCVFNLTGQEQQTTLPVEVASDLPVAHFTATRDGSTLTLPAYQAAFMQVA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156994 for 2469 contacts (-63.6/contact) +
2D Compatibility (PS) -35240 + (NN) -14863 + (LL) 4852
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -217695.0 ( -88.17 by residue)
QMean score : 0.406
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