Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNNLIETIEHFLAYSDDKLEELA-DKNYQLRQTIVEKEKIESREK-------- |
4F3V Chain:A ((1-275)) | GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT--HPEPKVAAALKDPSYRLKTT--TAEQIASRADPWDPGSVV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 656 for 172 contacts (3.8/contact) +
2D Compatibility (PS) -4408 + (NN) -2664 + (LL) 716
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -7450.0 ( -43.31 by residue)
QMean score : 0.516
|
|
|