Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLTFLLCSLYFVSIPAISTEEPLTLSQNRRYALTQTVVDKEMYFDAIPERPTTKIEISSFQDEALTITGETLVPNTLLSIVSLTINSNGIPVFTLSNGQFIKASREAIFNDLVSKQQSVSLDYWLKPSFVTYEAPYTNGVSEVKNNLKPYSRVHLVEQAETEHGIYYKTDSGFWISVEDLSVADNRMAKVQEVLLEKYNKDKYGIYIKQLNTQTVAGINIDRSMYSASIAKLATLYASQEQVKLGKLSLDSKFEYKDNVNQFPNSYDPSGSGKLEKKADHKLYTVKELLEATAKESDNVATNMLGYYVNNQYDSMFQTQVDTISGM------HW---------DMKKRQISPQAAGKMMEAIYYQN-------GDIVNYLSKTDFDNTRIPKNIP--VKVAHKIGDA--YDYKHDAAIVYA--EQPFIMIIFTDKSS-------YDDITKIADDVYQVLK |
| 3P09 Chain:A ((25-285)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDSFKNLENK--YDGKIGIYTLN----TNIKYNESYHFPICSVFKFLLVGAILDYDMHNQGFLDKKIPINQDDI------GKLGYAPITAKNVGKTLTISQLNYAAI-LSDSPASNILVRELGGL--QNLNKFIKK-LGDNDTIITADEPEINYTQPHSNINKTTPKAITKDIYKLAFGNILDKKHKDIFIKYLQDNNTGANRIAFSMPKDWIIGDKTGTCGQYAATNDVAIIWPKNQQPIALGILYTNPNDKNAPSNEEIIQQAAKLIANDLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76422 for 1883 contacts (-40.6/contact) +
2D Compatibility (PS) -23741 + (NN) -6519 + (LL) 14216
1D Compatibility (HY) -4400 + (ID) 2250
Total energy: -99116.0 ( -52.64 by residue)
QMean score : 0.371
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