Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDLTRGRITYRFK
1NNX Chain:A ((36-88))
--DDTWVTLRGNIVERISDDLYVFKDASG-TINVDIDHKRWN-GVTVTPKDTVEIQGEVDKDWNSVEIDVKQ
General information:
TITO was launched using:
RESULT:
Template:
1NNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31338 for 267 contacts (-117.4/contact) +
2D Compatibility (PS) -5736 + (NN) -890 + (LL) 316
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -41248.0 ( -154.49 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1NNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NNX-query.scw
PDB file :
Tito_Scwrl_1NNX.pdb
: