Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------MKMTVYFDGNFWLGLIEYDDDGDYKVFRYFFGKEPKDDDVFNFINH----KLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKH---RYQLKQEKRYQKKKGH |
1U3E Chain:M ((1-174)) | MEWKDIKGYEGHYQVSNTGEVYSIKSGKTLKHQIPKDGYHRIGLFKGGKGKTFQVHRLVAIHFCEGYEEGLVVDHKDGNKDNNLSTNLRWVTQKINVENQMSRGTLNVSKAQQIAKIKNQKPIIVISPDGIEKEYPS-TKCACEELGLTRGKVTDVLKGHRIHHKGYTFRYKLNG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1U3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 39312 for 795 contacts (49.4/contact) +
2D Compatibility (PS) -14596 + (NN) -1245 + (LL) 204
1D Compatibility (HY) -1200 + (ID) 850
Total energy: 21625.0 ( 27.20 by residue)
QMean score : 0.099
|
|
|