Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGEEALYENALNLVLPKAYEAAVAELGLDVVAQPKIDVVSMEKGQDWKLTAEVVTKPEVKLGDYKDLSVEVDASKEVSAEEVDAKVERERNNLAELTVKDGE-AAQGDTVVIDFVGSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGKDAKFVTTIHEVKTKEVPALDDELAKDIDDEVETLDELKAKYRKELESAKEIAFDDAVEGAAIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSA-----DMLKHDIAMKKAVDVITSSATVK |
| 1W26 Chain:A ((1-418)) | MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA-SVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIV-EVTDADVDGMLDTLRKQQATWKEKD-GAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDI-DVPAALIDSEIDVLRRQAAQRF---GGNEK-------QALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYED-PKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 133804 for 2579 contacts (51.9/contact) +
2D Compatibility (PS) -42059 + (NN) -7377 + (LL) 1240
1D Compatibility (HY) 27600 + (ID) 1350
Total energy: 111858.0 ( 43.37 by residue)
QMean score : 0.059
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