Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQEQLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3KP3 Chain:B ((26-110))
-------------------------LLKDLQTEYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEK--------IIKLSNKGKKYIKERKAIMSHIASDMTSDFDSKEIEKVRQVLEIIDYRIQSYTS
General information:
TITO was launched using:
RESULT:
Template:
3KP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54375 for 525 contacts (-103.6/contact) +
2D Compatibility (PS) -7723 + (NN) -150 + (LL) 3136
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -67862.0 ( -129.26 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3KP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP3-query.scw
PDB file :
Tito_Scwrl_3KP3.pdb
: