Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKGNKKLNSSKLGDYTPLEFGSIFLRIVKLLSDFIYVIILLFVMLGVGLAVGYLASQVDSVKVPSKNSLVTQVNTLTRVSRLTYSDKSQISEIDTDLQRTPVAKDAISDNIKKAIIATEDENFNDHKGVVPKAVLRAAAGSVLGFGESSGGSTLTQQLLKQQILGDDPSFKRKSKEIIYALALERYMDKDSILSDYLNVSPFGRNNKGQNIAGIEEAAQGIFGVSAKDLTIPQAAFLAGLPQSPIVYSPYTADAQLKSDKDLSFGIKRQKNVLYNMYRTRALTKDEYKSYKDYDIKKDFIKPAVATTNHHDYLYYSALSEAQKVMYNYLIKKDNVSEHDLKNDETRATYRHRAIEEIQQGGYTIKTTINKSVYQAMQDAAAQYGGLLDDGTGKVQMGNVLTDNSSGAIIGFIGGRNYSE-NQNNHAFDTARSPGSSIKPILPYGIAIDQGMLGSG-SVLSNYPTTYSS-GEKIMHADEEGTAMVNLQESLDISWNIPAFWTYKMLRDRGVDVKNYMEKLDYPIENF-G------IESLPLGGGIDTSVAQQTNLYQMIANGGVYHKQYMIESIEDSNGKVIYNHESKPVRVFSKATATILQQLLHGPINSGKTTTFKNRLQGLNSGLAGVDWIGKTGTTNST----SDVWLMLSTPKVTLGGWAGHDNNASLAKLTGYNNNANYMAHLVNAINNADGNTFGKSERFRLDDSVIKAKVLKSTGLQPGVVTVNGRRITVGGESTTSYWAKNGPGTMTYRFAIGGTDSDYQKAWSTLGGKR |
| 2V2F Chain:F ((28-381)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTTGMDVYTNVDQEAQKHLWDIYNSDQYVSYP-DDDLQVASTVVDVSNGKVIAQLGARH---SFGTNQAVETNRDWGSAMKPITDYAPAIEYGVYDSTATMVNDIPYNYPGTSTPVYNWDRAYFGNITLQYALQQSRNVTAVETL-NKVGL-DRAKTFLNGLGIDYPSMHYANAISSNTTESNKQ-YGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEF-SDVGTRAMKETTAYMMTEMMKTVLAY-GTGRGA--------YLPWLAQAGKTGTSNYTDYVAPDEMFVGYTRKYSMAVWTGYSNRLTPIVGDGFLVAAKVYRSMITYLSEGS-P-----EDWNIPEGLYRNGEFVFKNG------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85350 for 2759 contacts (-30.9/contact) +
2D Compatibility (PS) -34971 + (NN) -14293 + (LL) 25068
1D Compatibility (HY) -14400 + (ID) 3450
Total energy: -127396.0 ( -46.17 by residue)
QMean score : 0.461
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