Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQADEEDAQKALDFIKPDIALTINIKEAVDG-QVRALNAAGVEITDFNKGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK |
1EE1 Chain:B ((1-271)) | -SMQEKIMRELHVKPSIDPKQEIEDRVNFLKQYV-KKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGG-DAQFIAVRLPHG----EDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRTLLKELGAPERLYL---------------------ISYDEIDDYLEGKEVSAKVSEALEKRYSMTEHKRQVPASMFDDWWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80527 for 1927 contacts (-41.8/contact) +
2D Compatibility (PS) -26659 + (NN) -8644 + (LL) 1912
1D Compatibility (HY) -20400 + (ID) 7100
Total energy: -141418.0 ( -73.39 by residue)
QMean score : 0.473
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