Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKESFKLIATAAAGLEAIVGREIRNLGIDCQVENGRVRFHGDIKTIIETNLWLRAADRIKIIVGEFPARTFEELFQGVYGLDWENYLPLGAKFPIAKAKCVKSKLHNEPSVQAISKKAVAKKLQKVFHRPEGVPLQENGAEFKIEVSILKDKATVMIDTTGSSLFKRGYRAEKGGAPIKENMAAAIIQLSNWFPDKPLIDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEAWPWVDQSQVQKVRDEAESKANYDIDLDISGFDLDGRMVEIARKNAEEAGLGDVIKLKQMRLQDLKT-----DKINGVIISNPPYGERLLDDK------------AVDILYNEMGQTFAP-----LKTWSKFILTSDEGFEKKYGSQADKKRKLYNGTLKVDLYQYYGERVRRQVK |
| 3UFB Chain:A ((197-367)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKT--------------VEDR-----------EVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY-PRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVFAPYTDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61106 for 1138 contacts (-53.7/contact) +
2D Compatibility (PS) -16460 + (NN) -11871 + (LL) 15388
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -77449.0 ( -68.06 by residue)
QMean score : 0.471
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