Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------------------------------------------------MSDKKTFEENLQE--LETIVSRLETGDVALEDAIAEFQKGMLISKELQRTLKEAEETLVKVMQADGTEVEMDT------------------------------------------------------------------------------------
1G61 Chain:A ((2003-2227))
MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVNEVSEVLETKCLQTNIGGSSLVGSLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKGALISPELK----DFKKDIEDSL---NVEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSVGACIIANSKGAVVGGDTTGPELLIIEDALGL
General information:
TITO was launched using:
RESULT:
Template:
1G61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21298 for 349 contacts (-61.0/contact) +
2D Compatibility (PS) -6580 + (NN) 353 + (LL) 580
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -30645.0 ( -87.81 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_1G61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G61-query.scw
PDB file :
Tito_Scwrl_1G61.pdb
: