Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKSSFYKQRKGKLVCGVVAGLADKYNWDLALSRVLIALILYFTKFGLLLYILLAVFLPYKEDIIETRRQGPRR---RKDAEPVDDDGWFW---
4A54 Chain:A ((-1-94))
GMSVADFYGSNVEVLLNNDSKARGVITNFDSSNSILQLRLANDSTKSIVTKDIKDLRILPKNEIMPKNGTKSPSTNSTKLKSAETYSSKNKWSMD
General information:
TITO was launched using:
RESULT:
Template:
4A54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11159 for 430 contacts (-26.0/contact) +
2D Compatibility (PS) -8625 + (NN) 3993 + (LL) 0
1D Compatibility (HY) 4400 + (ID) 750
Total energy: -12141.0 ( -28.23 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_4A54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A54-query.scw
PDB file :
Tito_Scwrl_4A54.pdb
: