Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDY-EYIG-EHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNI----------QKNGNKVTTDYYIQVLDYLWKH--------RKKYDSLITYLEEAFPTDYYRALIPS-DVVVAQKPGYVREALNVGAIVK-E-EVPYIVAIYTAGLG--GSTQEDSEINGVGLYQLEQLCFV-INQWHRVNMN |
| 2WUQ Chain:A ((3-316)) | -------------------------------------------------------------------------------------------NSESLLRELRDALHEG---GLTGSFLVRDLYTGEELGIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITTPGPTGLS-RFRH-PARVAVDDLLYLSTSVSDGTASDALFEITP-PAQVEQMVREWGFRDLTVRHSMREHRVPQLDVARANTGTARAFVDLLEALWAPVLTGPALPPEPAARLRELMAANLLRHRLAPDFASDAATWSSKTGTLLNLRHEVGVVEHADGQVFAVAVLTESQVPADSQPGAEAL----MAQVARRLRDRLREWHHHH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106137 for 2146 contacts (-49.5/contact) +
2D Compatibility (PS) -26442 + (NN) -1496 + (LL) 8268
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -133357.0 ( -62.14 by residue)
QMean score : 0.380
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