Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVITVKNDIEGGKIAFTLLEEKMKAGAQT------LGLATGSSPITFYEEIVK----SNLDFSNMVSINLDEYVGIAASNDQSYSYFMHKHLFDAKPFKENN--LPNGLAKDLKEEIKRY-DAVINANPIDFQILGIGRNGHIGFNEPGTPFDITTHVVDLAPSTIEANSRFFNSIDDVPKQALSMGIGSIMKSKTIVLVAYGIEKAEAIASMIKGPITEDMPASILQKHDDVVIIVDEAAASKL
4R7T Chain:C ((1-247))
MRLIPLKAAAQVGKWAAAHIVKRINEFQPTAERPFVLGLPTGGTPLATYKALIEMHKAGEVSFKHVVTFNMDEYVGLAADHPESYRSFMYNNFFNHIDIQEENINLLNGNTDDHEAECKRYEDKIKSYGKINLFMGGVGNDGHIAFNEPASSLSSRTRIKTLTEDTRIANSRFFD-INQVPKYALTIGVGTLLDAQEIMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQEL
General information:
TITO was launched using:
RESULT:
Template:
4R7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148829 for 1908 contacts (-78.0/contact) +
2D Compatibility (PS) -25248 + (NN) -15415 + (LL) -28
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -212470.0 ( -111.36 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_4R7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R7T-query.scw
PDB file :
Tito_Scwrl_4R7T.pdb
: