Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTSKAAQQSMLTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAAKKELTEANYKEAYKNYTPETSVQVIKLDAEDKAKSVLKDVKADGADFAKIAKEKTTATD--KKVEY-KFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 2LJ4 Chain:A ((43-118)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------ELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSS--GEMMKPFEDAVRALKIGDISPIVQTDS------GLHIIKRLA-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15557 for 478 contacts (-32.5/contact) +
2D Compatibility (PS) -7992 + (NN) -5405 + (LL) 15748
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -16256.0 ( -34.01 by residue)
QMean score : 0.577
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