Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINIDEKPEKIE-YVKNLGFSAAPVIEAGNVVFSGFQPSKLKELV
2KHP Chain:A ((6-69))
-VDVIIYTRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVHVGGCDDLYALEDE
General information:
TITO was launched using:
RESULT:
Template:
2KHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21734 for 394 contacts (-55.2/contact) +
2D Compatibility (PS) -6820 + (NN) -1980 + (LL) 208
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -32776.0 ( -83.19 by residue)
QMean score : 0.806
(partial model without unconserved sides chains):
PDB file :
Tito_2KHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KHP-query.scw
PDB file :
Tito_Scwrl_2KHP.pdb
: