Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITLKSAREIEAMDRAGDFLASIHIGLRDIIKPGVDMWEVEEYVRRR-CKEENVLPLQIGVDGAVMDYPYATCCGLNDEVAHAFPRHYTLKQGDLLKVDMVLSEPLDKSIVDVSSLNFDNVAQMKKYTETYSGGLADSCWAYAVGEVSQEVKDLMSVTREAMYIGIEKAVIGNRIGDIGAAIQDYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERTY |
4FO7 Chain:D ((3-253)) | -VTIKTPDDIEKMRIAGRLAAEVLEMIGEHIKPGVTTEELDRICHDYIVNEQKAIPAPLNYKG----FPKSICTSINHVVCHGIPNEKPLKEGDILNVDITVIK------------------------DGYHG---DTSKMFLVGKTPEWADRLCQITQECMYKGISVVRPGAHLGDIGEIIQKHAEKNGFSVVREYCGHGIGKVFHEEPQVLHYGRAGTGIELKEGMIFTIEPMINQGRPETRL-LGDGWTAITKDRKLSAQWEHTVLVTADGYEILTLRNDETFP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122650 for 1947 contacts (-63.0/contact) +
2D Compatibility (PS) -26950 + (NN) -6755 + (LL) 2208
1D Compatibility (HY) -16000 + (ID) 4900
Total energy: -175047.0 ( -89.91 by residue)
QMean score : 0.477
|
|
|