Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGN-TEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
2FR5 Chain:D ((24-137))
-----------EAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYKDFRAIAISSDLQEEFISPCGACRQVMRE-FGTDWAVYMTKPDGTFVVRTVQELLPASFGPED
General information:
TITO was launched using:
RESULT:
Template:
2FR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45266 for 850 contacts (-53.3/contact) +
2D Compatibility (PS) -12362 + (NN) -3382 + (LL) 1212
1D Compatibility (HY) -10400 + (ID) 3450
Total energy: -73648.0 ( -86.64 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_2FR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FR5-query.scw
PDB file :
Tito_Scwrl_2FR5.pdb
: