Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVKVNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEK--GICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSLTLEEINEKYKQEDFSFLLPIEY-GVLDLPKVNLTEEDKVEISYGRRILLENEADTLAA-FYENRVIAILEKRGNEFKPHKVLL |
| 1SGV Chain:A ((4-282)) | TGPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAK--HLTIEAIDAAMERLRGEI----------------------------LEARPIRIDRFELLAAR---RRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQARSLDDLAERP-----ALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133180 for 1921 contacts (-69.3/contact) +
2D Compatibility (PS) -25955 + (NN) -3943 + (LL) 2600
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -179078.0 ( -93.22 by residue)
QMean score : 0.481
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