Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MEWQDLAQLPVSIFKDYVTDAQDAEKPFI----WTEVFLREINRSNQEIILHI----------------------WPMTKTVILGM-LDRELPHLELAK---KEIISRGYEPVVRNFGGLAVVADEGILNFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIE-----------HFEVETSYCPGKFDLSINGKKFAGLAQRRIKN--GIAVSIYLSVCGDQKERS---------------RMISDFYKIGLGDT-----GSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQVGFNDRLLMIRP---DLVAEFDRFQAKSMANKGTVSRDE------------- |
| 1DIK Chain:? ((2-376)) | AKWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSAARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDV--VMEVPKSHFEKIIDAMKEEKGVHFDTDL-TADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRDMQ-DMEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73175 for 1972 contacts (-37.1/contact) +
2D Compatibility (PS) -28921 + (NN) -3604 + (LL) 744
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -113406.0 ( -57.51 by residue)
QMean score : 0.187
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