Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISRKVALVTGASAGFGAAIVTKLVSDGYSVIGCARRMDKLKCF-GEKFSEGY---FYPLQMDITSRESVDKALESLPKNLQSIDLLVNNAGLALGLDKSYEADFEDWMTMINTNVVGLIYLTRCILPKMVE--VNRGLIINLGSTAG--TIPYPGANVYGASKAFVKQFSLNLRADL--AGTKIRVTNLEPGLCEGTEFSTVRFKGDHKRVEKLYEGAHAIQAEDIANTVSWVASQPEHININRIEIMPVSQTYGPQPVYRD
1XG5 Chain:D ((33-277))
----RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVE-TQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTGS----------
General information:
TITO was launched using:
RESULT:
Template:
1XG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152146 for 1974 contacts (-77.1/contact) +
2D Compatibility (PS) -24846 + (NN) -5725 + (LL) 676
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -204241.0 ( -103.47 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_1XG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XG5-query.scw
PDB file :
Tito_Scwrl_1XG5.pdb
: