Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHSSWHDLIKRELPNHYY-NKINTFMDAVYESGIVYPPRDKVFNAIQITPLENVKVVIIGQDPYHGPQQAQGLSFSVPDNLPAPPSLQNILKELAEDIGSRS---HHDLTSWAQQGVLLLNACLTVPEHQANGHAGLIWEPFTDAVIKVVNQKETPVVFILWGGYARKKKSLIDNPIHHIIESPHPSPLSAYRGFFGSRPFSRTNHFLEEEGINEIDWLN
5EUG Chain:A ((6-221))
----TWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPQPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWMP
General information:
TITO was launched using:
RESULT:
Template:
5EUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116740 for 1739 contacts (-67.1/contact) +
2D Compatibility (PS) -22821 + (NN) -13174 + (LL) 288
1D Compatibility (HY) -21600 + (ID) 5350
Total energy: -179397.0 ( -103.16 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_5EUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EUG-query.scw
PDB file :
Tito_Scwrl_5EUG.pdb
: