Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITY---TPTIVKNALQYIKKLKNV--
1BL0 Chain:A ((9-124))
DAITIHSILDWIEDNLESPLS-LEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKE----SNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPL
General information:
TITO was launched using:
RESULT:
Template:
1BL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107614 for 766 contacts (-140.5/contact) +
2D Compatibility (PS) -10878 + (NN) 340 + (LL) 388
1D Compatibility (HY) 4400 + (ID) 800
Total energy: -114164.0 ( -149.04 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_1BL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BL0-query.scw
PDB file :
Tito_Scwrl_1BL0.pdb
: