Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSLNGETLLTGLIANPARHSLSPLMWNTSFQEKNMNYAYLTFEVEEGKLTEAVRGVRALGIRGVNVSMPFKQSVIPLLDDLSPQAKLVGAVNTIVNQGGTGRLVGHMTDGIGCFKALAAQGFSAKNKIVTIAGIGGSGKAVAVQAAMEGVAEIRLFNRNSSNYDKVIDLSDKIKKQFQIKVVVDYLENKTAFKDAIRTSHFYIDATSLGMRPLDNYSLINDPEILTPNL-----VVVDLVYKPKETALLRFVRQNGVKHAYNGLGMLIYQGAEAFQLITNQEMPISSVERVLQTEN |
2HK9 Chain:D ((8-268)) | ---INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEG-AKVFLWNRTK---EKAIKLAQK----FPLEVV-------NSPEEVIDKVQVIVNTTSVGLKD-------EDPEIFNYDLIKKDHVVVDIIY--KETKLLKKAKEKGAK-LLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152268 for 2205 contacts (-69.1/contact) +
2D Compatibility (PS) -27817 + (NN) -10163 + (LL) 1656
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -217342.0 ( -98.57 by residue)
QMean score : 0.621
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