Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDVLRRLYKFAPEKKVYSYASLVLSAIATIFSVVPYFYLWKFLNELLVLKNLESANKYALWIFMFLVLQTLVYFLSLYCSHMFAFRVERNLKIEGLNNLLEASFSFFDTNPSGKTRQIIDDNASETHSILAHMQPDMVNAMVYPVILLVVSFLVSISFGIVMVVSLVLGVFLITKMFGNQNFLQKYMASNEDMSSEIVEYIRGVKVIKIFNIGIEKFRSLHKTIITSSELGYAYAISCRKWKVFYDSFFMGLCMVTIPYGVYLLNINTHLGEIISYTVFFTAFIELLYNAFNKVMFLGQNKAKAKNSIDKLEEIFNKMQVKKLDSGLSDEIQNFDIEFEKVSFKYEGNTPYVLKDLSFKLDSGKSYALIGSSGSGKSTIAKLISGFYDVDSGVIKIGGRDIKEYSRETIASSIAFVFQNAKLFKMSIYDNVRIGNPDATYEEIMQALEKARCNEILDKFELRE--NTMIGAEGVYLSGGETQRIVIARAILKNSPIIILDEASAAADPENEYELQMAFTQLIKNKTVIMIAHRLSAIKNMDEIIVVENGQIIERGSSKLLLEDKSSKYSYFMNMYIRANDWIMSNEV |
2FGK Chain:A ((7-241)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFIS--ELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161588 for 1831 contacts (-88.3/contact) +
2D Compatibility (PS) -24749 + (NN) -4310 + (LL) 30624
1D Compatibility (HY) -23200 + (ID) 4650
Total energy: -187873.0 ( -102.61 by residue)
QMean score : 0.547
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