Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTMIKNGDSIAVVNGDIELSYKDIDRQSNSFANGLLKAGFKCGDKIVLQLPNYHEFIIIAFAMFKVGIIPIMSLPAHRKNELKGIIEKSEAVAYIAKDKYLGFS---YVDMIRDIKIESDREFKVYILGEGDEFK--KFSELNDNNYI-YQKTEVDYKNIGLLLLSGGTTRIPKLIPRRHCDYLYVAKKTSIISGMDRGSIYLAALPMAHNFPLCCPGILGTFAVGGKVVVCEVTSPDEILPLIEEEKVTITGFVPAIANICMD-YLQYEDYDLSSLKIL |
| 3U16 Chain:B ((46-312)) | ---------SLAIICGERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSP--EIILMLNHQATDFGLLDWIETPAETFVDFSSTPAD--EVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKD-QIQSLKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202076 for 2123 contacts (-95.2/contact) +
2D Compatibility (PS) -27726 + (NN) -3576 + (LL) 856
1D Compatibility (HY) -20000 + (ID) 4300
Total energy: -256822.0 ( -120.97 by residue)
QMean score : 0.458
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