Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGE-READFINCVIWRQQAENLANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDDLPF
3EIV Chain:A ((4-118))
-ETVITVVGNLVDDPELRFTPSGAAVAKFRVASTP--------DGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRS--------RTVYELDVDEVGASLRSATAKVTKT-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62685 for 636 contacts (-98.6/contact) +
2D Compatibility (PS) -10369 + (NN) -3875 + (LL) -120
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -82699.0 ( -130.03 by residue)
QMean score : 0.737
(partial model without unconserved sides chains):
PDB file :
Tito_3EIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EIV-query.scw
PDB file :
Tito_Scwrl_3EIV.pdb
: