Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALEVTDATFVEE--TKEGLVLIDFWATWCGPCRMQAPILEQLSQEIDEDELKILKMDVDENPETARQFGIMSIPTLMFKKDGEVVKQVAGVHTKDQLKAIIAELS
3NOF Chain:B ((12-111))
--IKVTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATD-LTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGK---AALLRELS
General information:
TITO was launched using:
RESULT:
Template:
3NOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49865 for 679 contacts (-73.4/contact) +
2D Compatibility (PS) -10333 + (NN) 340 + (LL) 676
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -70932.0 ( -104.47 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_3NOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NOF-query.scw
PDB file :
Tito_Scwrl_3NOF.pdb
: