Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEILVLGAGYAGLKAVRNLQKQSGDFHITLVDMNDYHYEA-TELHEVAAGSQPKEKITFPIKDVINTNKVNFMQD-EVLKVDAENKTVTVKNNGELHYDYVVVALGFVSETFGIKGAMENALQMTNISQAENIHNHIVNTMKLYRETKDENLLKLLVCGAGFTGIELAGAMVDERPKYAALAGVKPEQIEIICVEAATRILPMFDDELAQYGVNLIKDLGINLMLGSMIKEIKPGEVVYGTSKEDEELKSITAGTIIWTTGVSGSPVMG-ESGFDQRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGRPFPTTAQIATRMGAHVAKNLLHQIKGEATEDFSYSPQGTVASVGNTHGLGVVGKTKIKKYPASVMKKIIMNKSLVDMGGLKELLAKGRFDLYH |
| 1XHC Chain:A ((9-297)) | -SKVVIVGNGPGGFELAKQLSQ---TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVITE-KGEVPYDTLVLATGARAREPQIKGK-EYLLTLRTIFDADRIKESI------------ENSGEAIIIGGGFIGLELAGNLAEA-------------GYHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFLNSELLEAN-EEGVLT-N--S---GFIEGKVKICAIGIVPNVDLARRSGIHTGRG-ILIDDNFRT-SAKDVYAIGDCAEYSG-----IIAGTAKAAMEQARVLADILKGEPRRYNFKFRSTVFKFGKLQIAIIGNTKGEGKWIEDNTKVFYIGAVVFNDIRKATKLE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231360 for 2397 contacts (-96.5/contact) +
2D Compatibility (PS) -31033 + (NN) -12763 + (LL) 2768
1D Compatibility (HY) -16800 + (ID) 3500
Total energy: -292688.0 ( -122.11 by residue)
QMean score : 0.554
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