Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHFENDYNKG-AHPELLNALIETNDQGLSGYGTDSYCQQAADKIREVCS------CPQAEVEFLVGGTQTNQVVISSMLASYEGVIAAETGHVSSHEAGAIEFSGHKVLTLPSH----NGKLLASEVATYIETFYADGNYQHMVFPGMVYISHP-TEYGTLYSKAELEELSKICKHYQIPLFIDGARLGYGLAAKDT-DVDFPTIAALSDVFYIGGTKMGALA--GEAVVFTKK-NRPKQFTTIVKQHGALLAKGRLLGLAFDRFFTDD--LYLKIGKHAIDLAEELKIILE--EKGYSFYLKSPTNQQFVIVE------NTKLTDLA-K-NVAYSFWEKYD-DHHTVIRLATSWSTSREDVTALRNVL |
| 1D2F Chain:A ((31-382)) | -LPFTISDMDFATAPCIIEALNQRLMHGVFGYSR-WKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAF--YKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP----------ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN--VARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG--CPRSKLEKGVAGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156576 for 2634 contacts (-59.4/contact) +
2D Compatibility (PS) -34629 + (NN) -7962 + (LL) 884
1D Compatibility (HY) -13200 + (ID) 2250
Total energy: -213733.0 ( -81.14 by residue)
QMean score : 0.497
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