Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKVLTACGNGMGSSMVIKMKVENALRQLGVSNFESASCSVGEAKGLAANYDIVVASNHLIHELDGRTKGHL---VGLDNLMDDNEIKTKLQEIL
3N9U Chain:I ((58-149))
-VYV------GSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR-
General information:
TITO was launched using:
RESULT:
Template:
3N9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23968 for 543 contacts (-44.1/contact) +
2D Compatibility (PS) -9068 + (NN) -718 + (LL) 560
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -35594.0 ( -65.55 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_3N9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N9U-query.scw
PDB file :
Tito_Scwrl_3N9U.pdb
: