Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSENLGQLAINQARENGGKLEVISKVKVED-KRDLSIAYTPGVASVSSAIA-------------EDVELAYELT--TK--KNTVAVVSDGSAVLGLGDIGPEAAMPVMEGKAALFKRFANVD---AVPIVLKTNDTEEII------------------------SIVKAISPTFG---GINLEDISAPRCFEIEQRLIEECDIPVFHDDQHGTAIVVLAALFNSLKLVKKDIEDIRVVVNGGGSAGLSITRKLLSAG----------AKHVTVVDRFGIINDKDRESLAPHHKAIAKLTNREFQSGSLEDALE--NADVFIGVSA-PEALHAEWISKMA---DKPIVFAMANPIP--EIYPDQALK--AGAYIVGTGR-----------SDFPNQINNVLAFPGIFRGALDARAKTITVEMQIAAARGIASLIPEEELSTTHIIPNAFQN-DVADVVAKSVSNAVQK |
| 1GQ2 Chain:A ((70-511)) | ------------------NEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCY-GMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNK--YCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRAS-LTPEKEHFAHEHC---EMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206063 for 3185 contacts (-64.7/contact) +
2D Compatibility (PS) -38430 + (NN) -11872 + (LL) 1248
1D Compatibility (HY) -26400 + (ID) 5200
Total energy: -286717.0 ( -90.02 by residue)
QMean score : 0.483
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