Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVLILGGAGYIGSHMVDQLITQGKEKVIVVDNLVTGHRQAV-------HSDAIFYEGDLSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIKNIVFSSTAATYGIPEQVPILETAPQ-NPINPYGESKLMMETIMKWADQAYGIKFVAL-RYFNVAGDKPDGSIGEDHKP-ETHLLPIILQVAQGVRDKIMIFGDDYNTPDGTNVRDYVHPFDLADAHILAVDYLRQGNESNVFNLGSSTGFSNLQMLEAARRITGKEIPAQKAARRPGDPDTLIASSEKARQILGWEPKFDNIDKIISSAWAWHSSHPNGYED |
| 1KVU Chain:A ((1-338)) | MRVLVTGGSGYIGSHTCVQLLQNGHD-VIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHA-IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVT-RTLDEMAQDTWHWQSRHPQGYPD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152925 for 2902 contacts (-52.7/contact) +
2D Compatibility (PS) -35451 + (NN) -15167 + (LL) 120
1D Compatibility (HY) -27200 + (ID) 6700
Total energy: -237323.0 ( -81.78 by residue)
QMean score : 0.535
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