Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITVGKLKEKYLKEGVAEYQKRLNRFSKIETIELADEKTPDKASISENQRILDIEGERILSKIGERDYVIGLAIEGKQ-----LPSESFSHLIDQKMISGYSTITFVIGG-SLGLSQKVKKRADYLMSFGLLTLPHQLMKLVLMEQIYRAFMIRQGTPYHK
3ILK Chain:A ((76-134))
----------------------------------------------------------------------SLVIGTSARLRHLQNTLIEPRECAEKVVA----YKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNK
General information:
TITO was launched using:
RESULT:
Template:
3ILK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30320 for 302 contacts (-100.4/contact) +
2D Compatibility (PS) -5822 + (NN) -3288 + (LL) 6168
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -37312.0 ( -123.55 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_3ILK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ILK-query.scw
PDB file :
Tito_Scwrl_3ILK.pdb
: