Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDSIGVKRHWIWQGAFVLILAGVITKILSAVYRVPFQNIVGDVGFYIYQQVYP------FLGI--AVMLSTSGFPVIISKLMNDYSEKNHHTILK----ISALFLSLIG------ILLFLCL-----YLGAV-PIALF-MGDSHLAVLIQVAAYAFL------LFPFVALLRGGF------QGRHEMLPSALSQMTEQFLRVAVLL-----GLSFWLVKKGASLYTAGAAAASGSLA-------------GSLVALIILGF--FWFKTKRDNQTDRQNENVITTKELTKKLLLYSVTICVSSLLLLFIQLVDALNLYALLSGGEASEEAKCLKGIYDRGQPLLQLGSVFAVSIATSLVPYISMAVKNKELKIMKEKITSSLKLCLVLGTGASAGLICILKPVNIMLFQNGEGTGALQVFSCSILFASLAVTAAAVLQGAGYTVFPAIAVGAGVAVKWVLNTLLVPRYGIEGASLATAASFAAVAGLNLYQLRQKEWLDKLR-GVLIPIIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIE---SLSAVAIGG---------AVFIYCMMRLGIFTDEELNSVP--FGSKLSKF-MRRREQNGG----------- |
| 1IKP Chain:A ((2-606)) | -EEAFDLWNEC--AKACVLDLKDGVRSSRMSVDPAIADT--NGQGVLHYSMVLEGGNDALKLAIDNALSITSDGLTIRLEGGVEPNKPVRYSYTRQARGSWSLNWLVPIGHEKPSNIKVFIHELNAGNQLSHMSPIYTIEMGDELLAKLARDATFFVRAHESNEMQPTLAISHAGVSVVMAQKRWSEWASGKVLCLLDQLDGVYNYLAQQRCNLDDTWEGKIYRVLAGNPAKHDLDIKPTVISHRLHFPEGGSLAALTAHQACHLPLETFTRHRQPRGAEQLEQCGYPVQRLVALYLAARLS------WNQVDQVIRNALASPGSGGDLGEAIREQPEQARLALTLAAAESERFVRQGTGNDEAGAANADVVSLTCPVAAGE--CA--GPADSGDALLERNYPTGAEFLGDGGDVSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQSIVFGGVRARSQDLDAIWRGFYIAGDPALAYGYAQDQEPDARGRIRNGALLRVYVPRSSLPGFYR--TSLTLAAPEAAGEVERLIGHPLPLRLDAITGPEEEGGRLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPDYASQPGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -434985 for 4165 contacts (-104.4/contact) +
2D Compatibility (PS) -54038 + (NN) 4580 + (LL) 2616
1D Compatibility (HY) -2800 + (ID) 4300
Total energy: -488927.0 ( -117.39 by residue)
QMean score : 0.225
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