Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQRRPAGKKIPFQKDSFLQQFEKLAQS-----RKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDE--MLFKEGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARY-IENFKMLSLDDLETPDIYFLVFDDIAVYDHQEESLWLITHVNGSDQETADVKLSELEQMWLTELPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVNLSIRQSQSLSVHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPELLVSKK-GKLLETRPIAGTRSRGKTNEEDEALANELIHNEKERAEHVMLVDLERNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSEEETKIR |
| 3LOG Chain:A ((25-450)) | --------------GVNPADLAAELAAVVTESVDEDYLLYEC--DGQWV-LAAGVQAMVELDSDELRVIRDGVTRRQQWSGRPGAALGEAVDRLL--------LETDQAFGWVAFEFGVHRYGLQQR---LAPHTPLARVFSPRTRIMVSEK--EIRLFDAGI--RH---REAIDRLLA---TG-V------REVPQSRSVDVSDDPSGFRRRVAVAVDEIAAGRYHKVILSRCVEVPFAIDFPLTYRLGRRHNTPVRSFLLQLGGIRALGYSPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRAAYQVGGRTWLRAGAGIIEESEPEREFEETCEKLSTLTPYLVA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144400 for 3743 contacts (-38.6/contact) +
2D Compatibility (PS) -45536 + (NN) -19949 + (LL) 4280
1D Compatibility (HY) -7600 + (ID) 4500
Total energy: -217705.0 ( -58.16 by residue)
QMean score : 0.444
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