Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIRE-I-SESKKASILSFLTRFIGAPPWKQDIQH-LIYRFCVELTRGGFT-HRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRF--SKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
| 3AFI Chain:E ((10-307)) | -----------RRAPVLGSSMAYRETGA-QDAPVVLFLHGNPTSSHI-WRN-ILPLVSPVAHCIAPDLIGFGQSGKPD---IAYRFFDHVRYLDAFIEQR----GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFR-T--PGEGE--AMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPES-RRPVLAFPRELPIAGEPADVYEAL--QSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASL--TRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGI- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154351 for 2466 contacts (-62.6/contact) +
2D Compatibility (PS) -29727 + (NN) -5838 + (LL) 2368
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -195948.0 ( -79.46 by residue)
QMean score : 0.383
|
|
|