Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQVSGGDIILLHASDSAKQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK
2C1I Chain:A ((231-422))
---------------------------------------------------DKKHQKVVALTFNDGPNPATTPQVLETLAKYDI-KATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRN---SLDLSFIMWDVDSLDWKSKNEASILTEIQHQVANGSIVLMHDIHS--PTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKA-----
General information:
TITO was launched using:
RESULT:
Template:
2C1I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75559 for 1567 contacts (-48.2/contact) +
2D Compatibility (PS) -20801 + (NN) -11550 + (LL) 6264
1D Compatibility (HY) -14400 + (ID) 2550
Total energy: -118596.0 ( -75.68 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_2C1I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C1I-query.scw
PDB file :
Tito_Scwrl_2C1I.pdb
: