Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRKT--IFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGID---TLLPDYKKQL-KGKRIGL-ITNPAGVNTS-----LKSSVDILYEN-PDIKLTALFGP---EHGVR----GDAQA----GDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYA-SFVGLYPIPLKHGMTIGELASL-FNKEFSIDADLTVVKMKHWKRKMDFD-DTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIK--STELEETLNSLHLPGVTFRAASFTPTFSKHQ----------GTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYE---------KTLQQFS-----KTRKKYLIY--------------- |
| 1NTH Chain:A ((2-458)) | TFRKSFDCYDFYDRAKVGEKCTQDDWDLMKIPMKAMELKQKYGLDFKGEFIPTDKDMMEKLFKAGFEMLLECGIYCTDTHRIVKYTEDEIWDAINNVQKEFVLGTGRDAVNVRKRSVGDKAKPIVQGGPTGSPISEDVFMPVHMSYALEK----EVDTIVNGVMTSVRGKSP-----IPKSPYEVLAAKTETRLIKNACAMAGRPGMGVKGP----ETSLSAQGNISADCTGGMTCTDSHEVSQLNELKIDLDAISV-IAHYKGNSDIIMDEQMPIF--GGYAGGIEETTIVDVATHINAVLMSSA-----SWHLDGPVHIRWGSTNTRETLMIAGWACATI--SEFTDILSGNQYYPCAGPCTEMCLLEASAQSITDTASGREILSGVASAKGVVTDKTTGMEARMMGEVARATAG---VEISEVNVILDKLVSLYEKNYASAPAGKTFQECYDVKTVTPTEEYMQVYDGARKKLEDLGLVF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18575 for 3525 contacts (5.3/contact) +
2D Compatibility (PS) -39160 + (NN) 1366 + (LL) 1276
1D Compatibility (HY) -10000 + (ID) 4350
Total energy: -32293.0 ( -9.16 by residue)
QMean score : 0.083
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