Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGD-----LIKGKDKIRVIDVLQHQSGLPSSFYFYTPEK-------AGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQG-EVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSAT----------DPTFALGWRRNGSKSMEWMFGP-HASENAYGHTGWTGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 4P6B Chain:A ((3-375)) | -------------------------------------------------DLLTNVAENYVNQDLFAGIEWRIDQDGKPIFQGCAGVKDI-------ETRTFIPKNAIYRIYSMTKPIV-SFLAMMLIERGVFRLSSPIQNFDPRFKSMKVIDQHAHIEPATALITIEHLLTHQAGFSYDFSLGCPISAHYRDAQLIEDGGRDLTDMMGVLAELPLVFHPGTQWKYSI-STDVLAHIIECATGERVDDLLQRLIFDPLDMQDTGFSLPLDG--ASRLMEVYG-M----GLPALK-PAPHVLVPADLGSSHPTDDPDFRRGGHGLYSTLDDYMAFANMLLSGQTPEGETLLSPAVLKLALAPRVHFGARGMRINDEPFAGYSWNLLGRVMTDVGAAAYATHLGEFGWSGAAATYFWVDPTKNMTGCVMTQFLGSQHP------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66197 for 2889 contacts (-22.9/contact) +
2D Compatibility (PS) -36450 + (NN) -14514 + (LL) 6500
1D Compatibility (HY) -11200 + (ID) 3200
Total energy: -125061.0 ( -43.29 by residue)
QMean score : 0.408
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