Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDKRFTSL--PKE----VLSQAL--GIQDRYPVVILKDDLPVGFFILHASKETLASYSNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRI--GPLGEQLILHHFL
3I9S Chain:A ((23-182))
---SVEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIM-FPAP---KLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITH--NCQRLDWTAESTNPTAGKFYKSIGASLIREKEYYRFEGNGLNKLAKS-
General information:
TITO was launched using:
RESULT:
Template:
3I9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98967 for 935 contacts (-105.8/contact) +
2D Compatibility (PS) -16170 + (NN) -5370 + (LL) 648
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -122459.0 ( -130.97 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_3I9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I9S-query.scw
PDB file :
Tito_Scwrl_3I9S.pdb
: