Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILMGGGFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLIIKGKIDG---DVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE----- |
4QGL Chain:A ((1-174)) | --GAAAMAQIRIHEVNTRI--ENEVKVSKFLQE-EGV--LYEKWNISKLPPHLNENYSLTDENKAEILAVFSKEIADVSARRGYKAHDVISLS------------NSTPNLDELLINFQKE---HHHT-----DDEVRFIVS-GHGIFAIEGK-DGTFFDVELEPGDLISVPENAR-------------HYFTLQDDRQVVAIRIFVTTEGWVPIY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16301 for 1160 contacts (14.1/contact) +
2D Compatibility (PS) -17603 + (NN) -3831 + (LL) 3844
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -7839.0 ( -6.76 by residue)
QMean score : 0.237
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