Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSGKP-YPEELSSEQWILVMQKLAAHGVADITLTGGEAKLIKG---FKELVVVASSL----FTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMD-NTHDQLR--GRKGGFKESMNTIKKLSEANIP-VIVAMTI--NESNADEVSDVV---EQCANAGA--FIFRAGKTLSVGRATEGFKALDIDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 4WCX Chain:A ((93-296)) | ---------------------------------------------------------------------------------------------------------VIFAPLYVSNYCVNNCRYCGYRHSNEQQRKKLTMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIVDVIKTIYDTKLKNGSIRRVNVNIAATTVENYKKLKKVGIGTYVLFQETYHRPTYEYMHPQGPKHDYDYHLTAMDRAMEAGIDDVGLGVLYGLYDYKYETVAMLYHANHLEEKFGVGPHTISVPRLRPA------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49452 for 1316 contacts (-37.6/contact) +
2D Compatibility (PS) -19281 + (NN) -9026 + (LL) 16328
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -66731.0 ( -50.71 by residue)
QMean score : 0.388
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