Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDK-NRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF
3SD2 Chain:A ((50-108))-----------------------------------------------------------------------SNILNVSFGRA--KDYAIITVTNKATGEIVHSKTYHN-TS----IVMIDM-SSCEKGEYTIHIILND----------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57 for 305 contacts (-0.2/contact) +
2D Compatibility (PS) -6216 + (NN) -2534 + (LL) 13140
1D Compatibility (HY) 0 + (ID) 200
Total energy: 4133.0 ( 13.55 by residue)
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_3SD2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SD2-query.scw
PDB file : Tito_Scwrl_3SD2.pdb: