Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMF----NTAVKILYRSLIELTNHRLSSYLIKGFCESKISKPVIPLFSKHFRLNWDDVDGTAADYGSLSELFIRQINLERRPVSKEAHAVVSP---VDGVVQTVGI------------INPNQTFTVKGKDYSFA---ELTGCKSADHQYNGGYFVVLYLS------------------PRHYHRFHSPISCRYQKLAELGNRSYPVNQLGLK---YGKDVLSKNYRFVYELNSGSRNVLMIP--------VGAMNINSIVQTNTRTELE---------IGEELGYFSFGSTVILVFEK-------------DAFQPSAHLAEGQEVQVGELIGYEE-----------------------
4XB6 Chain:C ((1-353))MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMR-GDEGYLLALAYSTQRGYGR-----NHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEVAGFVSHLKLPHYVDFQAELELLKRLQQEQNH


General information:
TITO was launched using:
RESULT:

Template: 4XB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 968 -26270 -27.14 -102.22
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain C : 0.64

3D Compatibility (PKB) : -27.14
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.069

(partial model without unconserved sides chains):
PDB file : Tito_4XB6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XB6-query.scw
PDB file : Tito_Scwrl_4XB6.pdb: