Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITLFQCLYLILFSFICYQGAAAFSHSTAASWLAAALGAAAAGLYIWNTKRVWKHCSSGLCAWIAVIQVMSVGVVLIGTDIMPVLCVIAIFAGCEGLRIGQSALQARLSDQIDKLTQAEQHANQMLIDVRSRNHDTMKHITAIKSAQPKADTQAYIQNWADQYSQYDRFLKGENAYVAGVLYDFLEKARASNVSVSLHMHTPLSSLPFSPADQVSLVGNILENALDSAAE------AREKAEIKLETSLRSGLYVLTCENSTPGMDPKVLDTIYQSFGRSTKN-GAHEGMGTYIIQKLVKGAFGRLDFTYRHP-IFRLEIKIPFQK
1Y8O Chain:A ((245-374))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEG-YPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFN-YMYS---PL--FGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKAL-


General information:
TITO was launched using:
RESULT:

Template: 1Y8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 433 -48423 -111.83 -452.55
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -111.83
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_1Y8O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y8O-query.scw
PDB file : Tito_Scwrl_1Y8O.pdb: